Inside the secret research complex, I came across Sitenero. I currently have high relations with everyone except for the Dominion.
However, when I meet Sitenero, the encounter always ends in a fight, with a character saying "In the name of Anfarel, I sentence you to die". However, this contradicts with the quest I have from the People to escort him out of the complex.
I'm not given a choice in dialogue to execute him or spare him, it will always go to execution. To note, I don't have the quest from the undead Anfarel to go into the complex. (I didn't take it since it tanks my rep with the Forge, despite both of the factions being allied now).
I think there's supposed to be a dialogue option to decide what your party does with Sitenero once you meet him?
Edit To Add: If I tank my relationship with the Rebellion (by accepting the Forge quest), you get the option between killing him and letting him come with you, rather than being forced to kill him. To note, in neither play have I accepted the final rebellion quest.